Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015892406.1_cds_XP_016447235.1_42015
CDS Infomation

[gene=LOC107772254] [db_xref=GeneID:107772254] [protein=probable protein phosphatase 2C 5] [protein_id=XP_016447235.1] [location=complement(join(13984..14203,16108..16331,16417..16542,16637..16744,16843..17060,17166..17337,17445..17663))] [gbkey=CDS]
Sequence

ATGAGTGAGGCGGAGATTACGAGGATGAAGCAAAAGACAACTCCGGTACCGTTAGGGACA
CTAATTGGTCGGGAGTTGAGGAATAATGATAAAGTGGAGCAGCCGACATTGAAGTATGGA
CAAGCTGCATTAGCAAAAAAAGGGGAAGATTATTTCTTAATTAAGCCTGATTGTCAGAGA
ATTCCGGGCAATCCATTGACCTCTTTTTCAGTTTTTGCGATTTTTGATGGGCATAATGGT
ATCTCGGCTGCTATATTCGCGAAAGAGAATCTATTGAACAATGTTTTGAGTGCTATTCCT
CAAGGAAGTAGCAGGGAAGAGTGGCTTCAAGCACTTCCTCGAGCACTAGTTGCAGGTTTT
GTGAAAACTGATATAGAGTTTCAGCAAAAAGGTGAGACATCTGGGACTACCGTGACGTTT
GTTGTGATTGATGGGTGGACGATTACTGTTGCATCAGTTGGAGATTCTAGGTGCATATTG
GATACCCAAGGAGGTGTGGTTTCTTTGTTGACTGTTGACCATCGATTAGAAGAGAATGAG
GAGGAACGGGAGCGTGTTACTGCAAGTGGTGGTGAAGTAGGAAGGCTCAATGTTTTTGGG
GGTAACGAGGTTGGACCTCTACGTTGCTGGCCTGGTGGGTTATGCCTTTCAAGGTCTATT
GGTGATACAGATGTTGGGGAGTTTATCGTTCCAATACCTCATGTCAAGCAAGTGAAGATT
TCAAATGCTGGTGGGAGGCTTATAATAGCCTCTGATGGTATATGGGATGCTTTATCATCG
GATTCGGCAGCGCAGTCTTGCAGAGGTTTACCAGCAGAACTTGCCGCAAAGCTGGTTGTT
AAGGAGGCTCTAAGGTCACGAGGTCTGAAGGATGATACAACCTGCTTGGTCGTTGATATT
ATTCCTTATGACCATCCTGTCTTGCCTCCAACGCCTAGGAAGAAACAAAATTTGCTCACT
TCTTTTCTCTTTGGGAGAAGATCACAAAATGCAAGATCTAATAAGCTTTCTGCTGTTGGT
GTTGTGGAAGAATTGTTTGAAGAGGGCTCTGCCATGCTTGCTGAGAGGCTTGGTAAAGAT
TTTCCTCTGGATTCTAGCTCTGGGCTCTTTAGATGTGCTGTTTGCCAAGCGGATCAGCCC
GCAAGTGAGGGCTTATCTGTAAACTCAGGCCCTTTCTTTTCACCTGCATCAAAGCCATGG
GAAGGCCCCTTCCTTTGTGCAACTTGTCGGAGGAAGAAAGACGCAATGGAAGGAAAAAGA
CCTAGTAGACCTACAATAACTGCTTAA

Peptide Sequence

PEP ID

XP_016447235.1
PEP Infomation

PREDICTED: probable protein phosphatase 2C 5 [Nicotiana tabacum]
Sequence

MSEAEITRMKQKTTPVPLGTLIGRELRNNDKVEQPTLKYGQAALAKKGEDYFLIKPDCQR
IPGNPLTSFSVFAIFDGHNGISAAIFAKENLLNNVLSAIPQGSSREEWLQALPRALVAGF
VKTDIEFQQKGETSGTTVTFVVIDGWTITVASVGDSRCILDTQGGVVSLLTVDHRLEENE
EERERVTASGGEVGRLNVFGGNEVGPLRCWPGGLCLSRSIGDTDVGEFIVPIPHVKQVKI
SNAGGRLIIASDGIWDALSSDSAAQSCRGLPAELAAKLVVKEALRSRGLKDDTTCLVVDI
IPYDHPVLPPTPRKKQNLLTSFLFGRRSQNARSNKLSAVGVVEELFEEGSAMLAERLGKD
FPLDSSSGLFRCAVCQADQPASEGLSVNSGPFFSPASKPWEGPFLCATCRRKKDAMEGKR
PSRPTITA

Transcript Sequence

Gene sequence data has not been registered.